BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C12SP1|AL428529
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1390 1574 0.0
3x_Contig1623 203 4e-52
3x_Contig1762 199 7e-51
3x_Contig17 195 1e-49
3x_Contig1487 191 2e-48
3x_Contig1718 187 3e-47
>3x_Contig1390
Length = 7609
Score = 1574 bits (790), Expect = 0.0
Identities = 813/822 (98%), Gaps = 2/822 (0%)
Strand = Plus / Plus
Query: 1 aggaagttgaaaccctgtttgttttcaacgtaacgaaatagcgttcctctactggagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5344 aggaagttgaaaccctgtttgttttcaacgtaacgaaatagcgttcctctactggagggt 5403
Query: 61 gacataatgagctttgaactaatcaaaacaaatatattagggcgtgtggtctagtggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5404 gacataatgagctttgaactaatcaaaacaaatatattagggcgtgtggtctagtggtat 5463
Query: 121 gattctcgctttgggttaacagcctggcgaas-ttcgataaacgaagtttaactactgca 179
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5464 gattctcgctttgggttaacagcctggcgaagcttcgataaacgaagtttaactactgca 5523
Query: 180 agcatgcgagaggccctgggttcaattcccagctcgccccaattaatttttcccaattta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 agcatgcgagaggccctgggttcaattcccagctcgccccaattaatttttcccaattta 5583
Query: 240 tttcccggtatatccgggtaatcgtactacattcataattcaaccttctttttccacttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5584 tttcccggtatatccgggtaatcgtactacattcataattcaaccttctttttccacttt 5643
Query: 300 mattcatatttacgatgaataagaagaagaattgagcctgaacatcaatatcaaacccaa 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644 aattcatatttacgatgaataagaagaagaattgagcctgaacatcaatatcaaacccaa 5703
Query: 360 atgcgcagaccgatcagatctgaagcccaagctcatcgcgagtgccataaacaacagaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5704 atgcgcagaccgatcagatctgaagcccaagctcatcgcgagtgccataaacaacagaaa 5763
Query: 420 ataccaattctcaaaatttatcacactaatgtcacaacaagcgagtaccgaactcacgat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5764 ataccaattctcaaaatttatcacactaatgtcacaacaagcgagtaccgaactcacgat 5823
Query: 480 cgaagagggagagctaccgacaaggtttgagattgaattagaatttgttcaatctttggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5824 cgaagagggagagctaccgacaaggtttgagattgaattagaatttgttcaatctttggc 5883
Query: 540 aaacataccatacgtcacatatctwctgacacaattgcagctttggcaagacccaaagtt 599
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5884 aaacataccatacgtcacatatctactgacacaattgcagctttggcaagacccaaagtt 5943
Query: 600 taanagatacttganataccttgagtactggcatgagccggaatatgcccaatgcattgt 659
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5944 taaaagatacttgaaataccttgagtactggcatgagccggaatatgcccaatgcattgt 6003
Query: 660 gtatccaaattctctattcgttttgaaacttttgaataccctatttgarggatctacagt 719
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6004 gtatccaaattctctattcgttttgaaacttttgaataccctatttgaaggatctacagt 6063
Query: 720 gaacgagaacggtgtgcttgahggatgtgaacacgtacctcgtattcttcaaactcaggg 779
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6064 gaacgagaacggtgtgcttgaaggatgtgaacacgtacctcgtattcttcaaactcaggg 6123
Query: 780 ta-ccaatggatgaatgagatggtggagaggtggagagagta 820
|| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6124 tacccaatggatgaatgagatggtggagaggtggagagagta 6165
>3x_Contig1623
Length = 14379
Score = 203 bits (102), Expect = 4e-52
Identities = 123/128 (96%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 98 tagggcgtgtggtctagtggtatgattctcgctttgggttaacagcctggcgaa-sttcg 156
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 7130 tagggcgtgtggtctagtggtatgattctcgctttgggttaatagcctagcgaagcttcg 7071
Query: 157 ataaacgaagtttaactactgc-aagcatgcgagaggccctgggttcaattcccagctcg 215
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7070 ataaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattcccagctcg 7011
Query: 216 ccccaatt 223
||||||||
Sbjct: 7010 ccccaatt 7003
>3x_Contig1762
Length = 22098
Score = 199 bits (100), Expect = 7e-51
Identities = 124/130 (95%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 96 attagggcgtgtggtctagtggtatgattctcgctttgggttaacagcctggcgaa-stt 154
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 6106 attagggcgtgtggtctagtggtatgattctcgctttgggttaatagcctagcgaagctt 6165
Query: 155 cgataaacgaagtttaactactgc-aagcatgcgagaggccctgggttcaattcccagct 213
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6166 cgataaacggagtttaactactgcaaagcatgcgagaggccctgggttcaattcccagct 6225
Query: 214 cgccccaatt 223
||||||||||
Sbjct: 6226 cgccccaatt 6235
>3x_Contig17
Length = 819
Score = 195 bits (98), Expect = 1e-49
Identities = 122/128 (95%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 96 attagggcgtgtggtctagtggtatgattctcgctttgggttaacagcctggcgaa-stt 154
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 262 attagggcgtgtggtctagtggtatgattctcgctttgggttaatagcctagcgaagctt 203
Query: 155 cgataaacgaagtttaactactgc-aagcatgcgagaggccctgggttcaattcccagct 213
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 202 cgataaacgaggtttaactactgcaaagcatgcgagaggccctgggttcaattcccagct 143
Query: 214 cgccccaa 221
||||||||
Sbjct: 142 cgccccaa 135
>3x_Contig1487
Length = 9002
Score = 191 bits (96), Expect = 2e-48
Identities = 117/122 (95%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 100 gggcgtgtggtctagtggtatgattctcgctttgggttaacagcctggcgaa-sttcgat 158
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 5452 gggcgtgtggtctagtggtatgattctcgctttgggttaatagcctagcgaagcttcgat 5393
Query: 159 aaacgaagtttaactactgc-aagcatgcgagaggccctgggttcaattcccagctcgcc 217
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5392 aaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattcccagctcgcc 5333
Query: 218 cc 219
||
Sbjct: 5332 cc 5331
>3x_Contig1718
Length = 19496
Score = 187 bits (94), Expect = 3e-47
Identities = 118/124 (95%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 99 agggcgtgtggtctagtggtatgattctcgctttgggttaacagcctggcgaas-ttcga 157
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 4905 agggcgtgtggtctagtggtatgattctcgctttgggttagtagcctagcgaagcttcga 4964
Query: 158 taaacgaagtttaactactgcaa-gcatgcgagaggccctgggttcaattcccagctcgc 216
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4965 taaacgaagtttaactactgcaaagcatgcgagaggccctgggttcaattcccagctcgc 5024
Query: 217 ccca 220
||||
Sbjct: 5025 ccca 5028
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6141
Number of Sequences: 1807
Number of extensions: 6141
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 6
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)